Gnosis BioDataome

Gnosis BioDataome: a collection of uniformly preprocessed and automatically annotated datasets for data-driven biology


Gnosis BioDataome is a database of uniformly preprocessed and disease-annotated genomic and epigenomic data with the aim to promote and accelerate the reuse of public data. We followed the same preprocessing pipeline for each biological mart (microarray gene expression, RNASeq gene expression, DNA methylation) to produce ready for downstream analysis datasets and automatically annotated them with Disease-Ontology terms. We also designate datasets that share common samples and automatically discover control samples in case-control studies. Currently, Gnosis-BioDataome includes 35 datasets, 5492 samples spanning 31 diseases. All datasets are publicly available for querying and downloading. Predictive analysis is performed on all the datasets using JAD Bio software of Gnosis Data Analysis. This collection is a subset for a subsequent larger effort with many more datasets.
Homo sapiens
5460 of 5492
Mus musculus
32 of 5492
GSE Species Entity Technology Type Samples Duplicates Disease ParentNode ChildNode Analyses
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